PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G127300.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 342aa    MW: 37674.8 Da    PI: 7.1879
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G127300.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.4e-052312691255
                        HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Aqcoe6G127300.4.p 231 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 269
                        7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.909219268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-11229282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.44E-5229273No hitNo description
Gene3DG3DSA:4.10.280.108.2E-9233276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MIQDLGYPNW VTNNFTNQSA HDLHLAKIKE ELSESAISCS SSSPEDYHLP STSYIRHDHR  60
GDIHDLNENI FLKNFSSNCQ LNELQGGSLY SNSSQSTPSF GGLATPNRGN FSQIFPTANI  120
SNPNSSFLSS SGMNLQVLDL LTSTNFSGGF NHQLAHNNLG LFKEAPSFSH DHLKEPSHWL  180
TNSHNKVSSF INGVTETKRS NSSVSEAKAS HTASKKPRLE SRSSLAPFKV RKEKLGDRIA  240
ALQQLVAPFG KTDTASVLME AIGYIKFLQD QVETLSVPYM KPSRNNTRRS IQEGSMEDVD  300
EEQKRDLRSR GLCLVPLSCM SYITNDNIGG WPSASDFGGR N*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281118.21e-125PREDICTED: transcription factor bHLH110 isoform X2
TrEMBLA5C1E11e-124A5C1E1_VITVI; Putative uncharacterized protein
TrEMBLE0CQH41e-125E0CQH4_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g12970.t011e-124(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-59bHLH family protein